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Protein Supersecondary Structures

Protein Supersecondary Structures


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About the Book

Annotation...Preface...Table of Contents...Contributing Authors...
1. 55 Years of the Rossmann FoldWoong-Hee Shin and Daisuke Kihara
2. Advances in Protein Super-Secondary Structure Prediction and Application to Protein Structure PredictionElijah MacCarthy, Derrick Perry, and Dukka B. KC
3. Automated Family-Wide Annotation of Secondary Structure ElementsAdam Midlik, Ivana Hutařová Vařeková, Jan Hutař, Taraka Ramji Moturu, Veronika Navrátilová, Jaroslav Koča, Karel Berka, and Radka Svobodová Vařeková
4. Computational Prediction of Secondary and Supersecondary Structures from Protein SequencesChristopher J. Oldfield, Ke Chen, and Lukasz Kurgan
5. StackSSSPred: A Stacking Based Prediction of Supersecondary Structure from SequenceMichael Flot, Avdesh Mishra, Aditi Sharma Kuchi, and Md Tamjidul Hoque
6. Information-Theoretic Inference of an Optimal Dictionary of Protein Supersecondary StructuresArun S. Konagurthu, Ramanan Subramanian, Lloyd Allison, David Abramson, Maria Garcia de la Banda, Peter J. Stuckey, and Arthur M. Lesk
7. Secondary and Supersecondary Structure of Proteins as Coupling between Local and Local and Backbone-Electrostatic Interactions: A View through Cluster-Cumulant Scope Adam Liwo, Adam K. Sieradzan, and Cezary Czaplewski
8. Learning Organizations of Protein Energy Landscapes: An Application on Decoy Selection in Template-Free Protein Structure PredictionNasrin Akhter, Liban Hassan, Zahra Rajabi, Daniel Barbará, and Amarda Shehu
9. Exploring Protein Supersecondary Structure through Changes in Protein Folding, Stability, and FlexibilityDouglas E. V. Pires, Carlos H. M. Rodrigues, Amanda T. S. Albanaz, Malancha Karmakar, Yoochan Myung, Joicymara Xavier, Eleni-Maria Michanetzi, Stephanie Portelli, and David B. Ascher
10. Protodomains: Symmetry Related Supersecondary Structures in Proteins and Self-ComplementarityPhilippe Youkharibache
11. bab Super Secondary Motifs: Sequence, Structural Overview and Pursuit of Potential Autonomously Folding bab Sequences from (b/a)8/TIM BarrelsRajasekhar Varma Kadamuri, Shivkumar Sharma Irukuvajjula, and Ramakrishna Vadrevu
12. Formation of Cross-Beta Supersecondary Structure by Soft-Amyloid Cores: Strategies for their Prediction and CharacterizationM. Rosario Fernández, Irantzu Pallarès, Valentín Iglesias, Jaime Santos, and Salvador Ventura
13. Stable Sub-Structures in Proteins and How to Find Them using Single-Molecule Force SpectroscopyKatarzyna Tych and Gabriel Zoldák
14. Supersecondary Structures and Fragment LibrariesRaphael Trevizani and Fábio Lima Custódio
15. Molecular Dynamics Simulations of Conformational Conversions in Transformer ProteinsBernard S. Gerstman, Prem P. Chapagain, Jeevan GC, and Timothy Steckmann
16. Sequence Pattern for Supersecondary Structure of Sandwich-Like ProteinsAlexander Kister
17. Homology Searches using Supersecondary Structure CodeHiroshi Izumi
18. Beyond Supersecondary Structure: Physics-Based Sequence AlignmentShalom Rackovsky
19. Secondary and Supersecondary Structure of Proteins in Light of the Structure of Hydrophobic CoresMateusz Banach, Leszek Konieczny, and Irena Roterman
20. Hands On: Using Tryptophan Fluorescen


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Product Details
  • ISBN-13: 9781493991600
  • Publisher: Humana Press
  • Publisher Imprint: Humana Press
  • Height: 254 mm
  • No of Pages: 438
  • Series Title: Methods in Molecular Biology
  • Sub Title: Methods and Protocols
  • Width: 178 mm
  • ISBN-10: 1493991604
  • Publisher Date: 04 Apr 2019
  • Binding: Hardback
  • Language: English
  • Returnable: Y
  • Spine Width: 25 mm
  • Weight: 1056 gr


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